| EST name | EST sequence |
| gi|157970387|gb|EX518665.1|EX518665 | TTACGGNCGGGGAAGAAGAGANGTCTATCACAGGCTCACTTCTCCNGCTCCCTCCATTGCACTCCCTCAAGCTCTCCTCT TCCTCTTCCTCTTCCGTTGCCACCCCTTTTCTCCATGGCTCCACTCCCCTCTCTCTCCTCTCAAAACCCTCTTCCGCTCT CACCAGTCCAACTCTGGCGCCGCCCTCTTTCCTTCCCCTAATCCGGGCCATGAGATCAATGCGGGGACGCGTCGTTTGCT CCACCAACGATAAGACCGTGGCCGTGGAGGTGGTGCGTTTAGCTCCTCATCCCAAGTACAAGAGGCGGGTCAGGAAGAAG AAGAAGTACCAGGCACATGACCCAGATAACCAGTTCAAGGTTGGGGACATTGTTCAGCTGGAGAAGAGCAGACCTATTAG CAAGACCAAGACCTTCGTCGCTGTCGCTGTTCCCGAAAGAAATTCGTCGAAGAAAAGTGGTGAAGAAGCTCAATCGCCCC AAGAGCTTGGAATTCCCTTGGAGTCTCAGCAACAACCGGTTTAGGCCTTAGAGTGAGGGTTTATAATTCAGAATTGGTTT GTGAATTTGACTGCTTTGTTTTTACTTGTTATGATAATGTTTCAAATTTTAGTGTACTTTGAATGCCCTTGTTGAATTGA TAACTCTAGTCTCTTATAAATTTGAGCTGTTTTTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAANCNTGT |
Most similar to sp|P16180|RR17_ARATH
>BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|O82204|RL281_ARATH 60S ribosomal protein L28-1 OS=Arabidopsis
thaliana GN=RPL28A PE=1 SV=1
Length = 143
Score = 147 bits (372), Expect(2) = 4e-41
Identities = 76/113 (67%), Positives = 90/113 (79%)
Frame = +3
Query: 135 VQFSREPXXXXXXXXXXXXGLANKKTVTIQSAGKDQSVLLATTKPRKQNKPAALLHKSVM 314
VQFS+E GLANKKTVTIQ+A KDQ+V+LATTK +KQNKP ++KS++
Sbjct: 31 VQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKTKKQNKPKLSVNKSIL 90
Query: 315 KKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGAKKRNRHA 473
KKEF RM+KAV NQV DNYYRPDLKKAALARLSA+++ LRVAKSGAK+RNR A
Sbjct: 91 KKEFPRMSKAVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGAKQRNRQA 143
Score = 41.2 bits (95), Expect(2) = 4e-41
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 46 MATVPGPLVWEVVKRNNSFLVK 111
MATVPG L+WE+VK NN FLVK
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVK 22
>sp|Q9M0E2|RL282_ARATH 60S ribosomal protein L28-2 OS=Arabidopsis
thaliana GN=RPL28C PE=2 SV=1
Length = 143
Score = 144 bits (364), Expect(2) = 1e-40
Identities = 73/113 (64%), Positives = 87/113 (76%)
Frame = +3
Query: 135 VQFSREPXXXXXXXXXXXXGLANKKTVTIQSAGKDQSVLLATTKPRKQNKPAALLHKSVM 314
VQFS+E GLANKKTVTIQ+AGKDQ V+L TTK ++QNKP ++KS++
Sbjct: 31 VQFSKESNNLVNINSYKHSGLANKKTVTIQAAGKDQGVVLGTTKTKRQNKPKLSVNKSIL 90
Query: 315 KKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVAKSGAKKRNRHA 473
KKEF RM+K V NQV DNYYRPDLKKAALARLSA+++ LRVAKSG K+RNR A
Sbjct: 91 KKEFSRMSKVVANQVVDNYYRPDLKKAALARLSAISKGLRVAKSGPKRRNRQA 143
Score = 43.1 bits (100), Expect(2) = 1e-40
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 46 MATVPGPLVWEVVKRNNSFLVK 111
MATVPG L+WE+VKRNN FLVK
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVK 22
BLASTX 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>sp|P16180|RR17_ARATH 30S ribosomal protein S17, chloroplastic
OS=Arabidopsis thaliana GN=RPS17 PE=2 SV=1
Length = 149
Score = 132 bits (333), Expect = 2e-30
Identities = 69/110 (62%), Positives = 84/110 (76%)
Frame = +3
Query: 183 PSFLPLIRAMRSMRGRVVCSTNDKTVAVEVVRLAPHPXXXXXXXXXXXXQAHDPDNQFKV 362
P+ +P+IRAM++M+GRVVC+T+DKTVAVEVVRLAPHP QAHDPDNQFKV
Sbjct: 41 PALVPVIRAMKTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKV 100
Query: 363 GDIVQLEKSRPISKTKTFVAVAVPERNSSKKSGEEAQSPQELGIPLESQQ 512
GD+V+LEKSRPISKTK+FVA+ V R + K EA + LG+PLESQQ
Sbjct: 101 GDVVRLEKSRPISKTKSFVALPVIARAARK---AEAGGDELLGLPLESQQ 147